STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscSCysteine desulfurase NifS. (386 aa)    
Predicted Functional Partners:
nifU_1
NifU-like protein.
 
 0.999
nifU_2
NifU-like protein.
  
 0.999
Lery_0405
Rrf2 family transporter protein.
  
 
 0.986
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
 
 
 0.980
Lery_2432
Oxidoreductase, FAD-binding protein.
  
 0.974
Lery_1284
Abi-like protein.
  
 0.962
Lery_1668
Polyketide synthase module.
   
 
 0.962
Lery_0319
Hypothetical protein.
    
 0.849
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.845
acpP_2
Acyl carrier protein.
    
 
 0.845
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.