Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lery_1653 | Lery_1654 | Lery_1653 | Lery_1654 | ABC transporter permease. | ABC transporter ATP binding protein. | 0.992 |
| Lery_1653 | Lery_2249 | Lery_1653 | Lery_2249 | ABC transporter permease. | ABC transporter ATP-binding protein. | 0.953 |
| Lery_1653 | lolA | Lery_1653 | Lery_2127 | ABC transporter permease. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.902 |
| Lery_1653 | lolC | Lery_1653 | Lery_2032 | ABC transporter permease. | Lipoprotein-releasing system transmembrane protein lolC. | 0.631 |
| Lery_1653 | lolD | Lery_1653 | Lery_2031 | ABC transporter permease. | ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.977 |
| Lery_1654 | Lery_1653 | Lery_1654 | Lery_1653 | ABC transporter ATP binding protein. | ABC transporter permease. | 0.992 |
| Lery_1654 | lolA | Lery_1654 | Lery_2127 | ABC transporter ATP binding protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.860 |
| Lery_1654 | lolC | Lery_1654 | Lery_2032 | ABC transporter ATP binding protein. | Lipoprotein-releasing system transmembrane protein lolC. | 0.950 |
| Lery_1654 | lolD | Lery_1654 | Lery_2031 | ABC transporter ATP binding protein. | ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.562 |
| Lery_2126 | ftsK | Lery_2126 | Lery_2128 | Recombination factor protein RarA. | Cell division protein FtsK. | 0.837 |
| Lery_2126 | lolA | Lery_2126 | Lery_2127 | Recombination factor protein RarA. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.819 |
| Lery_2126 | nadE | Lery_2126 | Lery_2010 | Recombination factor protein RarA. | Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.590 |
| Lery_2249 | Lery_1653 | Lery_2249 | Lery_1653 | ABC transporter ATP-binding protein. | ABC transporter permease. | 0.953 |
| Lery_2249 | lolA | Lery_2249 | Lery_2127 | ABC transporter ATP-binding protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.860 |
| Lery_2249 | lolC | Lery_2249 | Lery_2032 | ABC transporter ATP-binding protein. | Lipoprotein-releasing system transmembrane protein lolC. | 0.943 |
| Lery_2249 | lolD | Lery_2249 | Lery_2031 | ABC transporter ATP-binding protein. | ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.467 |
| amiB | lolA | Lery_0624 | Lery_2127 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.923 |
| ftsK | Lery_2126 | Lery_2128 | Lery_2126 | Cell division protein FtsK. | Recombination factor protein RarA. | 0.837 |
| ftsK | lolA | Lery_2128 | Lery_2127 | Cell division protein FtsK. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.843 |
| lolA | Lery_1653 | Lery_2127 | Lery_1653 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter permease. | 0.902 |
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