STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parA_2Chromosome partitioning protein ParA. (349 aa)    
Predicted Functional Partners:
parB_2
Chromosome partitioning protein parB; Belongs to the ParB family.
 
 
 0.916
parB_4
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.898
parB_1
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.879
Lery_2136
Hypothetical protein.
       0.773
parB_3
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.767
soj
Sporulation initiation inhibitor protein Soj.
  
   
 0.739
Lery_0035
Major facilitator family transporter.
  
     0.589
Lery_2170
Integrase; Belongs to the 'phage' integrase family.
  
     0.584
Lery_2215
Hypothetical protein.
  
     0.582
dnaA
Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.544
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.