Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
copA1Copper efflux ATPase. (743 aa)    
Predicted Functional Partners:
cueO
Multicopper oxidase.
 
 
 0.874
Lery_0684
Cation transporting ATPase PacS.
 
0.872
csoR
Copper-sensing transcriptional repressor CsoR.
 
  
 0.838
copA_3
Copper efflux ATPase.
 
 
 0.802
cecC_1
Chemiosmotic efflux system C protein C.
  
    0.774
cecA_1
Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.762
cecB_1
Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.746
cecA_2
Chemiosmotic efflux system C protein A.
       0.746
ctpA_2
Cation efflux transporter.
   
 0.454
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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