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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2170Integrase; Belongs to the 'phage' integrase family. (340 aa)    
Predicted Functional Partners:
Lery_1099
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.679
Lery_0035
Major facilitator family transporter.
  
     0.660
bcp
Acetylpolyamine aminohydrolase.
  
     0.651
Lery_2215
Hypothetical protein.
  
     0.639
Lery_2613
Coiled-coil protein.
  
     0.614
qseC_2
Two component sensor kinase.
  
     0.610
parA_2
Chromosome partitioning protein ParA.
  
     0.584
Lery_2171
Putative addiction module antidote protein, family (containing the CopG/Arc/MetJ DNA-binding domain).
 
     0.547
plaB
Phospholipase.
  
     0.542
Lery_1827
L-gulono-gamma-lactone oxidase.
  
     0.526
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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