STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2172Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. (98 aa)    
Predicted Functional Partners:
Lery_2171
Putative addiction module antidote protein, family (containing the CopG/Arc/MetJ DNA-binding domain).
 
 
 0.998
dinJ
Antitoxin DinJ.
   
   0.957
ybiA_1
Swarming motility protein YbiA.
  
     0.637
ybiA_2
Swarming motility protein YbiA.
  
     0.627
Lery_1699
Coiled-coil protein.
  
     0.622
Lery_1272
Hypothetical protein.
  
     0.524
Lery_0855
Hypothetical protein.
  
     0.508
Lery_2170
Integrase; Belongs to the 'phage' integrase family.
       0.435
Lery_1860
Sensor histidine kinase/response regulator LuxN.
  
     0.415
yafQ
mRNA interferase YafQ.
       0.408
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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