STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2176Antitoxin HipB. (96 aa)    
Predicted Functional Partners:
Lery_2177
Hypothetical protein.
 
 
 0.984
Lery_2858
Hypothetical protein.
 
 
 0.887
Lery_2175
DEAD/DEAH box helicase.
 
     0.824
Lery_2178
Hypothetical protein.
       0.790
higA
Antitoxin HigA.
  
     0.772
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.725
Lery_2179
Hypothetical protein.
       0.704
metB
Cystathionine beta-lyase.
  
 
 0.667
Lery_2363
Hypothetical protein.
  
 
 0.544
sahH
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.501
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.