Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lery_0224 | yhdE | Lery_0224 | Lery_2227 | Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.419 |
| Lery_0704 | yhdE | Lery_0704 | Lery_2227 | Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.735 |
| Lery_0721 | Lery_1668 | Lery_0721 | Lery_1668 | O-methyltransferase. | Polyketide synthase module. | 0.937 |
| Lery_0721 | bioI | Lery_0721 | Lery_1558 | O-methyltransferase. | Biotin biosynthesis cytochrome P450. | 0.799 |
| Lery_0721 | yhdE | Lery_0721 | Lery_2227 | O-methyltransferase. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.900 |
| Lery_1668 | Lery_0721 | Lery_1668 | Lery_0721 | Polyketide synthase module. | O-methyltransferase. | 0.937 |
| Lery_1668 | bioI | Lery_1668 | Lery_1558 | Polyketide synthase module. | Biotin biosynthesis cytochrome P450. | 0.998 |
| Lery_1668 | yhdE | Lery_1668 | Lery_2227 | Polyketide synthase module. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.540 |
| bioI | Lery_0721 | Lery_1558 | Lery_0721 | Biotin biosynthesis cytochrome P450. | O-methyltransferase. | 0.799 |
| bioI | Lery_1668 | Lery_1558 | Lery_1668 | Biotin biosynthesis cytochrome P450. | Polyketide synthase module. | 0.998 |
| bioI | yhdE | Lery_1558 | Lery_2227 | Biotin biosynthesis cytochrome P450. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.423 |
| mreC | yhdE | Lery_2636 | Lery_2227 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.526 |
| yhdE | Lery_0224 | Lery_2227 | Lery_0224 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.419 |
| yhdE | Lery_0704 | Lery_2227 | Lery_0704 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.735 |
| yhdE | Lery_0721 | Lery_2227 | Lery_0721 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | O-methyltransferase. | 0.900 |
| yhdE | Lery_1668 | Lery_2227 | Lery_1668 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Polyketide synthase module. | 0.540 |
| yhdE | bioI | Lery_2227 | Lery_1558 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Biotin biosynthesis cytochrome P450. | 0.423 |
| yhdE | mreC | Lery_2227 | Lery_2636 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.526 |