STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2244Xaa-Pro aminopeptidase. (435 aa)    
Predicted Functional Partners:
ubiH_1
2-octaprenyl-6-methoxyphenol hydroxylase.
  
  
 0.838
ubiH_2
2-polyprenyl-6-methoxyphenol hydroxylase.
  
  
 0.838
Lery_2243
Hypothetical protein; Belongs to the UPF0149 family.
 
   
 0.740
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.713
Lery_0084
FAD dependent oxidoreductase.
  
 
 0.682
trpE
Anthranilate synthase.
    
  0.682
zapA
Cell division protein ZapA.
     
 0.618
Lery_2247
Outer membrane efflux protein.
       0.604
Lery_2249
ABC transporter ATP-binding protein.
       0.604
Lery_2248
Membrane-fusion protein AcrA.
       0.602
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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