Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2247Outer membrane efflux protein. (541 aa)    
Predicted Functional Partners:
Lery_2248
Membrane-fusion protein AcrA.
 
  0.975
Lery_2250
ABC transporter permease.
 
 
 0.953
acrA
RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.949
Lery_0068
Outer membrane protein TolC.
     
 0.930
Lery_0699
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.926
Lery_2249
ABC transporter ATP-binding protein.
 
 
  0.924
Lery_0698
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
  0.879
lmxF
RND multidrug efflux transporter MexF.
    
  0.879
Lery_2748
Putative helicase/relaxase.
 
  
  0.847
Lery_0779
Hypothetical protein.
  
     0.768
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.