Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lptBLipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein. (241 aa)    
Predicted Functional Partners:
lptC
Lipopolysaccharide export system protein LptC.
  
 0.998
Lery_0414
Hypothetical protein.
 
 
 0.994
Lery_2286
OstA family protein.
  
 
 0.992
Lery_0415
Hypothetical protein.
 
 
 0.990
kdsD
Polysialic acid capsule expression protein.
 
  
 0.931
Lery_2288
Hydrolase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
 
  
 0.915
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.866
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.866
trpG
Anthranilate synthase component II.
       0.866
Lery_1551
ABC transporter permease.
      0.856
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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