STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2295BolA like protein; Belongs to the BolA/IbaG family. (81 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.843
Lery_2297
Putative NIF3-like protein 1.
 
     0.831
grlA
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 
 0.716
mutT_4
Mutator MutT protein.
       0.648
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
     
 0.647
ttg2D
Toluene tolerance protein Ttg2D.
       0.636
Lery_2294
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
       0.636
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
       0.633
ttg2B
Toluene tolerance protein Ttg2B.
       0.633
sspA
Stringent starvation protein A.
 
     0.527
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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