STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadA_2Zinc, cobalt and lead efflux system. (717 aa)    
Predicted Functional Partners:
Lery_0684
Cation transporting ATPase PacS.
 
0.876
Lery_2375
Transcriptional regulator, ArsR family.
  
    0.811
copA_3
Copper efflux ATPase.
 
 
 0.791
Lery_2374
Hypothetical protein.
       0.789
Lery_2372
Response regulator receiver.
       0.658
helC_2
HelC protein.
 
    0.631
cueO
Multicopper oxidase.
  
 
 0.591
helB_2
HelB protein.
       0.530
helA_2
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.509
ctpA_2
Cation efflux transporter.
   
 0.454
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.