Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctpA_2Cation efflux transporter. (896 aa)    
Predicted Functional Partners:
cebC
Chemiosmotic efflux system B protein C.
  
    0.839
cebB
Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.839
Lery_1668
Polyketide synthase module.
  
 
 0.831
Lery_2410
Metallo-beta lactamase family transporter protein.
 
   0.790
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
 
 0.754
Lery_2412
Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
  
  
 0.737
Lery_1205
Hypothetical protein; Belongs to the UPF0276 family.
   
    0.710
Lery_2413
Hypothetical protein.
       0.676
Lery_1898
Transmembrane protein.
    
 
 0.652
Lery_1203
Signal peptide protein.
   
    0.642
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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