STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cebCChemiosmotic efflux system B protein C. (418 aa)    
Predicted Functional Partners:
cebB
Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.988
Lery_2409
Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
  0.896
helB_2
HelB protein.
  
  0.824
helB_1
HelB protein.
  
  0.822
ctpA_2
Cation efflux transporter.
  
    0.797
helB_3
HelB protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.763
Lery_0035
Major facilitator family transporter.
  
 
  0.701
helC_3
HelC protein.
  
     0.693
bcp
Acetylpolyamine aminohydrolase.
  
     0.691
plaB
Phospholipase.
  
     0.659
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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