Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_2432Oxidoreductase, FAD-binding protein. (625 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 0.996
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 0.993
Lery_1051
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.979
Lery_0890
Choline monooxygenase.
 
 
 0.975
Lery_2433
Hypothetical protein.
 
     0.962
Lery_2434
Hypothetical protein.
 
     0.960
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.898
iscS
Cysteine desulfurase NifS.
  
 0.895
Lery_0399
Metal-sulfur cluster biosynthetic enzyme.
  
 
 0.891
Lery_2754
CDP-6-deoxy-delta-3,4-glucoseen reductase.
 
 
 0.890
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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