Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lery_2175 | Lery_2187 | DEAD/DEAH box helicase. | Putative conjugative transfer protein TraI. | 0.826 |
Lery_2175 | Lery_2190 | DEAD/DEAH box helicase. | Putative sex pilus assembly and mating pair protein TraG. | 0.767 |
Lery_2175 | Lery_2192 | DEAD/DEAH box helicase. | Putative conjugative transfer protein TrbB. | 0.761 |
Lery_2175 | Lery_2195 | DEAD/DEAH box helicase. | Putative conjugative transfer protein TrbC. | 0.738 |
Lery_2175 | Lery_2199 | DEAD/DEAH box helicase. | Putative conjugative transfer protein TraC. | 0.736 |
Lery_2175 | Lery_2429 | DEAD/DEAH box helicase. | Putative F0F1-type ATP synthase, subunit b; Belongs to the ATPase B chain family. | 0.559 |
Lery_2175 | Lery_2431 | DEAD/DEAH box helicase. | Putative ATP synthase F1, gamma subunit. | 0.637 |
Lery_2175 | Lery_2432 | DEAD/DEAH box helicase. | Oxidoreductase, FAD-binding protein. | 0.602 |
Lery_2175 | Lery_2433 | DEAD/DEAH box helicase. | Hypothetical protein. | 0.765 |
Lery_2175 | Lery_2434 | DEAD/DEAH box helicase. | Hypothetical protein. | 0.831 |
Lery_2187 | Lery_2175 | Putative conjugative transfer protein TraI. | DEAD/DEAH box helicase. | 0.826 |
Lery_2187 | Lery_2190 | Putative conjugative transfer protein TraI. | Putative sex pilus assembly and mating pair protein TraG. | 0.902 |
Lery_2187 | Lery_2192 | Putative conjugative transfer protein TraI. | Putative conjugative transfer protein TrbB. | 0.901 |
Lery_2187 | Lery_2195 | Putative conjugative transfer protein TraI. | Putative conjugative transfer protein TrbC. | 0.901 |
Lery_2187 | Lery_2199 | Putative conjugative transfer protein TraI. | Putative conjugative transfer protein TraC. | 0.898 |
Lery_2187 | Lery_2429 | Putative conjugative transfer protein TraI. | Putative F0F1-type ATP synthase, subunit b; Belongs to the ATPase B chain family. | 0.659 |
Lery_2187 | Lery_2431 | Putative conjugative transfer protein TraI. | Putative ATP synthase F1, gamma subunit. | 0.690 |
Lery_2187 | Lery_2432 | Putative conjugative transfer protein TraI. | Oxidoreductase, FAD-binding protein. | 0.675 |
Lery_2187 | Lery_2433 | Putative conjugative transfer protein TraI. | Hypothetical protein. | 0.769 |
Lery_2187 | Lery_2434 | Putative conjugative transfer protein TraI. | Hypothetical protein. | 0.768 |
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