Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
aacA4Aminoglycoside N(6')acetyltransferase. (206 aa)    
Predicted Functional Partners:
Lery_1606
Hypothetical protein.
  
     0.757
nadE
Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.745
Lery_2357
GNAT family acetyltransferase.
  
    0.723
rir1
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.711
Lery_2190
Putative sex pilus assembly and mating pair protein TraG.
  
     0.677
Lery_2187
Putative conjugative transfer protein TraI.
  
     0.655
Lery_2192
Putative conjugative transfer protein TrbB.
  
     0.634
Lery_2199
Putative conjugative transfer protein TraC.
  
     0.613
Lery_1843
Hypothetical protein.
  
     0.610
Lery_2195
Putative conjugative transfer protein TrbC.
  
     0.596
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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