Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
Lery_2552Signal transduction protein. (380 aa)    
Predicted Functional Partners:
Lery_2553
RDD family protein.
       0.708
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
       0.651
sdhA_2
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.650
Lery_2551
Succinate dehydrogenase cytochrome b556 subunit C.
       0.644
sdhB
Succinate dehydrogenase iron-sulfur subunit.
       0.641
Lery_2468
Flagellar hook-length control protein FliK.
  
     0.537
Lery_2353
Muramidase, peptidoglycan hydrolase FlgJ.
 
     0.535
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
     0.535
Lery_2333
Putative asmA protein.
  
     0.530
sucA
2-oxoglutarate dehydrogenase E1.
       0.517
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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