Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_2569Cytokinin oxidase. (470 aa)    
Predicted Functional Partners:
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.913
etfA
Electron transfer flavoprotein subunit alpha.
 
  0.700
Lery_1668
Polyketide synthase module.
   
 0.696
Lery_2467
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
    
 0.644
cycA
Cytochrome c.
    
  0.638
etfB
Electron transfer flavoprotein subunit beta.
  
 0.608
Lery_2568
Hypothetical protein.
       0.574
sdhB
Succinate dehydrogenase iron-sulfur subunit.
    
 0.568
Lery_0345
Short chain dehydrogenase/reductase family oxidoreductase.
 
  
  0.563
Lery_1681
2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.562
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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