Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gadCGlutamate/gamma-aminobutyrate antiporter. (473 aa)    
Predicted Functional Partners:
Lery_2570
Coiled-coil protein.
       0.847
Lery_0373
Amino acid antiporter.
     
  0.842
Lery_1052
Amino acid antiporter.
     
  0.842
Lery_2569
Cytokinin oxidase.
 
     0.549
Lery_1146
Amino acid transporter PotE.
  
     0.530
nfdA
N-substituted formamide deformylase precursor.
       0.530
nadE
Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.510
Lery_1996
NG,NG-dimethylarginine dimethylaminohydrolase.
  
    0.507
Lery_0123
Amino acid antiporter.
     
  0.478
Lery_1562
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.456
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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