STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2608Multidrug resistance efflux pump. (398 aa)    
Predicted Functional Partners:
Lery_2609
Drug resistance transporter, Bcr/CflA.
 
    0.887
Lery_2607
Siderophore synthetase component.
 
    0.831
Lery_1668
Polyketide synthase module.
    
 0.662
Lery_0035
Major facilitator family transporter.
  
     0.471
yhbY
Putative RNA-binding protein.
       0.465
Lery_1945
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.464
rssA
Esterase of the alpha-beta hydrolase superfamily protein.
  
     0.444
Lery_2610
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.440
hda
ATPase regulatory factor involved in DnaA inactivation; Belongs to the DnaA family. HdA subfamily.
       0.440
Lery_2215
Hypothetical protein.
  
     0.430
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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