STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_26803-hydroxyisobutyryl-CoA hydrolase. (258 aa)    
Predicted Functional Partners:
Lery_0946
Sensory box histidine kinase/response regulator.
    
 0.988
Lery_2143
Sensory histidine-kinase / response regulator.
    
 0.987
gacS/letS
Transmission sensor LetS.
    
 0.986
acdA
Short chain-specific acyl CoA dehydrogenase.
 
 0.982
Lery_1668
Polyketide synthase module.
  
 0.973
Lery_2681
Enoyl-CoA hydratase/carnithine racemase.
 
 
 
0.958
Lery_2466
Glutaryl CoA dehydrogenase.
  
 0.933
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.924
atoB
Acyl CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.920
yfcY
beta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.918
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.