Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
wrbA_2Flavoprotein WrbA (Trp repressor binding protein). (199 aa)    
Predicted Functional Partners:
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
  
  
 
0.865
Lery_2823
Pirin-like protein; Belongs to the pirin family.
       0.847
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.842
Lery_0112
DNA-binding protein; Belongs to the Dps family.
   
  
 0.706
Lery_0660
Serine protein kinase.
   
    0.614
Lery_2385
Hypothetical protein.
   
    0.608
Lery_2484
LysM domain-containing protein.
   
    0.603
Lery_2822
Dot/Icm secretion system substrate.
       0.576
ribF
Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.
     
  0.564
Lery_2825
Integral membrane protein.
       0.561
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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