STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrbA_2Flavoprotein WrbA (Trp repressor binding protein). (199 aa)    
Predicted Functional Partners:
Lery_2823
Pirin-like protein; Belongs to the pirin family.
       0.768
Lery_2385
Hypothetical protein.
   
    0.645
Lery_1926
Nitroreductase.
  
 
 0.640
Lery_0112
DNA-binding protein; Belongs to the Dps family.
   
  
 0.620
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
  
  
 
0.592
Lery_2825
Integral membrane protein.
       0.554
Lery_2822
Dot/Icm secretion system substrate.
       0.547
Lery_2484
LysM domain-containing protein.
   
  
 0.521
rlmL
Ribosomal RNA large subunit methyltransferase L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.490
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
    
 0.471
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.