STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2829Outer membrane component of multidrug efflux pump. (485 aa)    
Predicted Functional Partners:
Lery_2830
Putative membrane fusion protein.
 
  0.978
Lery_2831
Toxin secretion ABC transporter ATP-binding protein.
 
 
  0.960
Lery_2832
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.817
Lery_2834
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.801
Lery_2835
Hypothetical protein.
 
     0.767
Lery_2401
Membrane protein.
  
     0.747
Lery_2394
Hypothetical protein.
  
     0.735
Lery_2399
TraU protein.
  
     0.735
Lery_2387
Bile acid beta-glucosidase.
  
     0.729
Lery_2396
Exported membrane protein.
  
     0.729
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.