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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lery_2832LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
Lery_2829
Outer membrane component of multidrug efflux pump.
 
     0.879
Lery_2831
Toxin secretion ABC transporter ATP-binding protein.
 
     0.868
Lery_2830
Putative membrane fusion protein.
 
     0.853
Lery_2834
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.826
Lery_2835
Hypothetical protein.
 
     0.806
Lery_2833
NADH-ubiquinone oxidoreductase chain 5.
 
     0.805
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.584
Lery_2401
Membrane protein.
  
     0.566
aacA4
Aminoglycoside N(6')acetyltransferase.
  
     0.548
Lery_2399
TraU protein.
  
     0.527
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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