Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lery_2847Chitinase. (745 aa)    
Predicted Functional Partners:
eglS
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
0.888
chtA
Chitinase 63 precursor.
  
  
 0.834
tesA
Esterase TesA precursor.
  
 0.821
chiA1
Chitinase A1 precursor; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.801
Lery_0819
Chitinase.
     
 0.799
cpbD
Chitin-binding protein CbpD.
  
  
 0.753
Lery_2405
Hypothetical protein.
  
 
  0.659
Lery_2396
Exported membrane protein.
   
 
 0.591
Lery_1643
Glycosyl hydrolase family protein.
     
 0.541
Lery_2313
Glycosyl hydrolase.
     
 0.541
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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