Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lery_2899Ankyrin repeat protein. (391 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 0.891
arp_1
Ankyrin repeat protein.
  
 
   0.803
arp_2
Ankyrin repeat protein.
  
     0.773
Lery_2056
Ankyrin repeats (3 copies).
  
     0.768
Lery_2901
Glycosyltransferase.
  
     0.762
Lery_2489
Ankyrin repeat protein.
  
     0.760
Lery_1930
Ankyrin 3.
  
     0.657
Lery_2731
Sulfate transporter.
    
  0.621
Lery_2054
Ankyrin repeat domain-containing protein.
  
     0.560
Lery_0363
Hypothetical protein.
  
 
  0.559
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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