STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0047Putative 3-oxoacyl-[acyl-carrier-protein] reductase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (326 aa)    
Predicted Functional Partners:
fabG9
3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
 
 0.738
fabG12
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Family membership.
  
 
   0.697
mxcC
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.669
sce0048
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; Family membership; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.491
sce3451
Dehydrogenase; Family membership.
  
 
   0.472
sce0046
Predicted acetyltransferase; Family membership.
       0.467
speB1
Agmatinase; Family membership; Belongs to the arginase family.
       0.458
plsC1
1-acylglycerol-3-phosphate O-acyltransferase; Family membership.
       0.458
sce0049
Thiolase; Family membership; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.441
sce5369
Putative Retinol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.403
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.