Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sce0061Putative cAMP-binding protein. (459 aa)    
Predicted Functional Partners:
sce8187
cAMP-dependent protein kinase regulatory subunit; Family membership.
  
     0.730
sce7616
Adenylate cyclase; Family membership.
 
 
 0.718
sce4318
cAMP-binding protein Probable transcriptional regulatory protein; Specificity unclear.
  
     0.637
sce1725
Putative adenylate cyclase.
  
   0.627
sce1676
Cyclic nucleotide binding protein.
  
     0.624
sce6986
Hypothetical protein predicted by Glimmer/Critica.
  
   0.615
sce2782
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.603
sce8819
Hypothetical protein; 5-nucleotidase/23-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
  
 
 0.595
sce3998
Unnamed protein product; Family membership.
 
 
 0.581
sce5780
Hypothetical protein; FOG: TPR repeat.
  
     0.578
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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