STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
argB1ArgB1 protein; High confidence in function and specificity. (444 aa)    
Predicted Functional Partners:
argF1
ArgF1 protein; High confidence in function and specificity; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
     0.944
argJ
Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
  
  0.933
argB2
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
  
 
0.919
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
    
  0.911
gdhA1
Glutamate dehydrogenase; Family membership; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
aspB1
Aspartate transaminase; Family membership.
     
  0.900
gdhA2
Glutamate dehydrogenase; Family membership; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
gdhA3
Glutamate dehydrogenase (NADP(+)); High confidence in function and specificity; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
argH
Argininosuccinate lyase; High confidence in function and specificity.
 
     0.739
nadC
Nicotinate-nucleotide diphosphorylase (carboxylating); Belongs to the NadC/ModD family.
 
     0.680
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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