STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce0103Hypothetical protein. (137 aa)    
Predicted Functional Partners:
sce0106
Uncharacterized low-complexity proteins.
 
    0.913
sce0109
Uncharacterized protein conserved in bacteria.
 
    0.841
sce0107
COG: Uncharacterized protein conserved in bacteria.
 
     0.828
sce0108
COG: Uncharacterized protein conserved in bacteria.
 
     0.821
sce0105
Uncharacterized low-complexity proteins.
 
     0.809
sce5665
Uncharacterized low-complexity proteins.
 
    0.782
sce1202
Uncharacterized protein conserved in bacteria.
 
    0.781
sce3105
Uncharacterized protein conserved in bacteria.
 
    0.781
sce4107
Uncharacterized protein conserved in bacteria.
 
    0.781
sce8357
Hypothetical protein.
 
    0.781
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.