STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0166ABC transporter permease protein; Specificity unclear. (302 aa)    
Predicted Functional Partners:
ssuB-2
ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.993
sce0165
ABC-type transporter substrate-binding protein; Specificity unclear.
 
 
 0.992
ssuA
Aliphatic sulfonate ABC transporter, substrate-binding protein; High confidence in function and specificity.
 
 0.972
ssuB
Aliphatic sulfonate ABC transporter, nucleotide binding/ATPase protein; High confidence in function and specificity.
 
 0.971
sce1324
ABC transporter ATP-binding protein; Specificity unclear.
 
 0.970
sce1862
Putative periplasmic substrate-binding protein.
 
 
 0.969
astR
Sulfate ester binding protein (ABC superfamily,peri_bind).
 
 
 0.967
sce1321
ABC transporter substrate-binding protein; Specificity unclear.
 
 
 0.965
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 0.894
ssuE
FMN reductase; High confidence in function and specificity.
 
 
  0.875
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.