Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce0168Monooxygenase; Specificity unclear. (450 aa)    
Predicted Functional Partners:
sce0165
ABC-type transporter substrate-binding protein; Specificity unclear.
 
  
 0.902
ssuB-2
ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
  
 0.852
sce0166
ABC transporter permease protein; Specificity unclear.
  
  
 0.819
ssuE
FMN reductase; High confidence in function and specificity.
 
 
 0.689
sce1416
ABC transport system substrate-binding protein; Family membership.
  
 0.578
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
     0.543
sce4103
ABC transporter, periplasmic substrate-binding protein; Family membership.
  
 0.503
sce6823
NRPS/PKS hybrid.
     
 0.419
sce0164
Transcriptional regulator, LysR family; Family membership; Belongs to the LysR transcriptional regulatory family.
       0.406
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.