STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce0216Hypothetical protein. (242 aa)    
Predicted Functional Partners:
sce3465
Putative secreted protein.
  
     0.665
sce8208
CDP-diacylglycerol--serine O-phosphatidyltransferase.
  
     0.647
sce9258
Hypothetical protein.
  
     0.638
sce2557
Putative secreted protein.
  
     0.620
sce4975
Putative secreted protein.
  
     0.591
sce5359
Hypothetical protein predicted by Glimmer/Critica.
  
     0.589
sce9133
Putative secreted protein; Family membership.
  
    0.584
sce5401
Hypothetical protein.
  
     0.566
sce8210
Putative DNA helicase; Family membership.
 
     0.562
sce2039
Glutamyl endopeptidase; Family membership; Belongs to the peptidase S1B family.
  
     0.556
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.