Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
sce0337Oxidoreductase, short chain dehydrogenase/reductase family; Function unclear; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (279 aa)    
Predicted Functional Partners:
sce8219
AMP-dependent synthetase and ligase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
   0.908
sce3273
Putative short chain dehydrogenase.
  
 
   0.732
sce2893
Putative short-chain dehydrogenases; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.716
sce8666
Probable dehydrogenase; Family membership.
  
 
   0.699
fabG2
3-oxoacyl-[acyl-carrier-protein] reductase; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.653
mxcG
Nonribosomal peptide synthetase; High confidence in function and specificity.
    
 0.572
sce8255
Non-ribosomal peptide synthetase; Family membership.
 
    
 0.546
sce0338
Rubredoxin; High confidence in function and specificity.
       0.468
sce3451
Dehydrogenase; Family membership.
  
 
   0.456
sce4308
Dehydrogenase; Family membership.
  
 
   0.450
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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