STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0495Hypothetical protein predicted by Glimmer/Critica. (183 aa)    
Predicted Functional Partners:
topB
DNA topoisomerase III; High confidence in function and specificity.
  
 
 0.795
sce0099
Probable PPE family protein.
  
     0.771
sce5887
Hypothetical protein predicted by Glimmer/Critica; Family membership.
  
     0.753
sce2027
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.664
sce2836
Putative membrane protein.
  
     0.657
sce8646
Hypothetical protein predicted by Glimmer/Critica.
  
     0.615
sce4532
Hypothetical protein; FOG: WD40 repeat.
  
     0.548
sce3298
PE-PGRS family protein.
  
     0.538
pepA2
Putative aminopeptidase.
  
 
   0.527
sce9147
Hypothetical protein.
  
     0.523
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.