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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBCopper tolerance protein. (493 aa)    
Predicted Functional Partners:
copA
Multicopper oxidase; High confidence in function and specificity.
 
     0.948
sce8114
Hypothetical protein.
 
     0.783
sce2660
Unknown protein; Predicted phosphohydrolases.
  
     0.613
czcB2
Heavy metal efflux pump, CzcB family; High confidence in function and specificity; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.599
sce8102
Multicopper oxidase; Family membership.
 
     0.564
sce7173
Putative secretion protein.
 
 
 0.536
sce0798
Multicopper oxidase.
 
     0.522
cumA
Oxidoreductase; Family membership.
 
     0.522
sce8100
Multicopper oxidase; Family membership.
 
     0.506
sce6575
Putative membrane protein.
  
     0.501
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.