Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cyaXPutative adenylate cyclase; Family membership; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (641 aa)    
Predicted Functional Partners:
ndk
Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.900
rel
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.900
mazG
Hypothetical protein; Family membership.
     
  0.900
sce3710
Sensory box/GGDEF family protein.
  
 0.821
moaA1
Probable molybdenum cofactor biosynthesis protein A.
     
  0.800
moaA3
GTP 3',8-cyclase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
     
  0.800
folE
Putative GTP cyclohydrolase I; Belongs to the GTP cyclohydrolase I family.
     
  0.800
sce4090
Adenylate cyclase family 3 (some proteins contain HAMP domain).
  
     0.684
sce8187
cAMP-dependent protein kinase regulatory subunit; Family membership.
  
   0.673
sce3988
Unnamed protein product; Family membership.
 
   0.671
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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