STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce0576Low molecular weight heat shock protein; Family membership; Belongs to the small heat shock protein (HSP20) family. (128 aa)    
Predicted Functional Partners:
sce0577
Heat shock protein, HSP20 family; Family membership; Belongs to the small heat shock protein (HSP20) family.
 
   
0.693
sce4390
ATPase with chaperone activity, two ATP-bindingdomains; Family membership; Belongs to the ClpA/ClpB family.
 
 
 0.654
sce0334
ATP-dependent Clp protease, ATP-binding subunit, two ATP-binding domains; Family membership.
  
 
 0.604
sce0335
ATPase with chaperone activity, two ATP-bindingdomains; Family membership.
  
 
 0.604
clpA
Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family.
  
 
 0.604
sce7162
ATP-dependent Clp protease, ATP-binding subunit,two ATP-binding domains; Family membership.
  
 
 0.604
clpB2
ATPase with chaperone activity, two ATP-bindingdomains; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.604
sce7923
ATPase with chaperone activity, two ATP-binding domains; Family membership; Belongs to the ClpA/ClpB family.
  
 
 0.603
sce8441
Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains; Family membership; Belongs to the ClpA/ClpB family.
  
 
 0.603
grpE
Chloroplast GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]
  
 
 0.545
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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