Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bcpA | sce0598 | sce0599 | sce0598 | Carboxyvinyl-carboxyphosphonate phosphorylmutase; High confidence in function and specificity. | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | 0.594 |
bcpA | sce0600 | sce0599 | sce0600 | Carboxyvinyl-carboxyphosphonate phosphorylmutase; High confidence in function and specificity. | Putative hydroxylase. | 0.780 |
sce0598 | bcpA | sce0598 | sce0599 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Carboxyvinyl-carboxyphosphonate phosphorylmutase; High confidence in function and specificity. | 0.594 |
sce0598 | sce0600 | sce0598 | sce0600 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydroxylase. | 0.632 |
sce0598 | sce1882 | sce0598 | sce1882 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative secreted hydrolase. | 0.696 |
sce0598 | sce3492 | sce0598 | sce3492 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Epoxide hydrolase. | 0.604 |
sce0598 | sce3513 | sce0598 | sce3513 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydrolase; Family membership. | 0.767 |
sce0598 | sce4000 | sce0598 | sce4000 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydrolase; Family membership. | 0.739 |
sce0598 | sce4150 | sce0598 | sce4150 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydrolase of unknown specificity; Function unclear. | 0.658 |
sce0598 | sce5010 | sce0598 | sce5010 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydrolase; Family membership. | 0.663 |
sce0598 | sce6663 | sce0598 | sce6663 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydrolase. | 0.757 |
sce0598 | sce7493 | sce0598 | sce7493 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | Putative hydrolase. | 0.637 |
sce0600 | bcpA | sce0600 | sce0599 | Putative hydroxylase. | Carboxyvinyl-carboxyphosphonate phosphorylmutase; High confidence in function and specificity. | 0.780 |
sce0600 | sce0598 | sce0600 | sce0598 | Putative hydroxylase. | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | 0.632 |
sce1882 | sce0598 | sce1882 | sce0598 | Putative secreted hydrolase. | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership. | 0.696 |
sce1882 | sce3492 | sce1882 | sce3492 | Putative secreted hydrolase. | Epoxide hydrolase. | 0.629 |
sce1882 | sce3513 | sce1882 | sce3513 | Putative secreted hydrolase. | Putative hydrolase; Family membership. | 0.631 |
sce1882 | sce4000 | sce1882 | sce4000 | Putative secreted hydrolase. | Putative hydrolase; Family membership. | 0.699 |
sce1882 | sce5010 | sce1882 | sce5010 | Putative secreted hydrolase. | Putative hydrolase; Family membership. | 0.515 |
sce1882 | sce6663 | sce1882 | sce6663 | Putative secreted hydrolase. | Putative hydrolase. | 0.642 |
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