STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0625Electron transfer flavoprotein alpha-subunit; Family membership. (323 aa)    
Predicted Functional Partners:
sce0626
Putative electron transfer flavoprotein beta-subunit; Family membership.
 0.999
sce1166
acyl-Coenzyme A dehydrogenase, short/branched chain.
 
 
 0.932
sce6907
Acyl-CoA dehydrogenase.
 
 
 0.932
sce2853
Acyl-CoA dehydrogenase.
 
 
 0.931
sce9239
Isovaleryl-CoA dehydrogenase; Family membership.
 
 
 0.931
sce6972
Acyl-CoA dehydrogenase.
 
 
 0.929
sce7626
Acyl-CoA dehydrogenase.
 
 
 0.927
sce8801
Acyl-CoA dehydrogenase; Family membership.
 
 
 0.925
sce1997
Putative Acyl-CoA dehydrogenase.
 
 
 0.924
sce0587
Probable acyl-CoA dehydrogenase.
 
 
 0.919
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.