STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBtolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (444 aa)    
Predicted Functional Partners:
tolR1
Putative transport transmembrane protein; Specificity unclear.
 
  
 0.958
tolQ1
Putative transport transmembrane protein, tolQ; High confidence in function and specificity.
 
  
 0.934
sce0648
ompA-family exported protein; Family membership.
 
 
 0.869
sce4039
Hypothetical protein.
 
 
   0.810
sce0651
Putative tonB-like protein; Specificity unclear.
       0.791
mxcH
Probable TonB-dependent receptor; Family membership.
   
 
 0.787
tolR2
Biopolymer transport protein, ExbD/TolR family; Specificity unclear.
 
  
 0.704
sce2614
Hypothetical protein; Cytochrome c peroxidase.
 
 
   0.693
tolR3
Biopolymer transport protein, ExbD/TolR family; Family membership.
 
  
 0.679
tolR5
tolR protein; High confidence in function and specificity.
 
  
 0.673
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.