Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppgKPolyphosphate-glucose phosphotransferase; High confidence in function and specificity. (230 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; High confidence in function and specificity; Belongs to the GPI family.
 
  
 0.936
algC
AlgC protein; High confidence in function and specificity.
  
 
 0.923
glk
Glk protein; High confidence in function and specificity; Belongs to the bacterial glucokinase family.
    
 0.922
pgm3
Pgm3 protein; High confidence in function and specificity.
    
 0.918
galM2
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.913
galM1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.913
hxk
Hxk protein; High confidence in function and specificity.
     
 0.911
zwf1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.847
zwf2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.847
fba1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
 0.846
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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