Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
sce0688Endonuclease/exonuclease/phosphatase family. (1174 aa)    
Predicted Functional Partners:
sce7039
Putative 5'-nucleotidase family protein; Family membership; Belongs to the 5'-nucleotidase family.
   
 0.934
phoD
Putative alkaline phosphatase.
 
  
 0.514
sce0799
Putative alkaline phosphatase.
 
  
 0.470
sce5883
PhoD_N domain-containing protein; Unnamed protein product; Specificity unclear.
 
  
 0.470
spoVR
Stage V sporulation protein R; High confidence in function and specificity.
   
    0.468
sce1630
Uncharacterized protein conserved in bacteria.
  
    0.423
sce6739
Putative lipase; Family membership.
  
     0.408
sce3277
Putative Esterase; Esterase with broad substrate specificity, that may be involved in degradation of plant biomass present in the habitat of S.cellulosum. In vitro, displays acetyl esterase activity, aryl esterase activity, paraben esterase activity, carboxyl esterase activity, poly-3-hydroxybutyric acid (PHB) depolymerase activity, and a low feruloyl esterase activity. Does not possess any paraoxonase activity. Is able to bind to multiple substrate molecules simultaneously.
  
     0.407
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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