STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpSHypothetical protein predicted by Glimmer/Critica; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (285 aa)    
Predicted Functional Partners:
dps
Probable DNA-binding stress protein, Dps family; High confidence in function and specificity; Belongs to the Dps family.
   
 
 0.790
sce7884
Hypothetical DNA-binding ferritin-like protein,Dps family; Family membership; Belongs to the Dps family.
   
 
 0.790
sce4390
ATPase with chaperone activity, two ATP-bindingdomains; Family membership; Belongs to the ClpA/ClpB family.
 
 
 0.768
sce0093
Hypothetical protein predicted by Glimmer/Critica; Belongs to the Dps family.
   
 
 0.741
sce0335
ATPase with chaperone activity, two ATP-bindingdomains; Family membership.
  
 
 0.654
clpA
Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family.
  
 
 0.654
sce7162
ATP-dependent Clp protease, ATP-binding subunit,two ATP-binding domains; Family membership.
  
 
 0.654
clpB2
ATPase with chaperone activity, two ATP-bindingdomains; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.654
sce0334
ATP-dependent Clp protease, ATP-binding subunit, two ATP-binding domains; Family membership.
  
 
 0.653
himA
Integration host factor alpha-subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
   
  
 0.593
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.