STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce0754ABC transporter, ATP-binding protein. (359 aa)    
Predicted Functional Partners:
sce0755
Unnamed protein product; Hypothetical protein.
  
 
 0.830
sce0756
Hypothetical protein predicted by Glimmer/Critica.
       0.553
sce5713
Cell division cycle protein 48-related protein; Family membership; Belongs to the AAA ATPase family.
  
   0.553
sce5572
Putative integral membrane transport protein.
  
  
 0.506
sce2512
Hypothetical protein.
  
  
 0.499
sce4422
Putative ABC-2 type transport system permease protein.
 
 
 0.487
sce2533
Putative ABC-2 type transport system permease protein.
 
 
 0.453
sce2430
Unnamed protein product; Hypothetical protein.
 
 
 0.451
cysS2
Cysteine--tRNA ligase; High confidence in function and specificity; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.451
cysA
Sulfate-transporting ATPase; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
    
0.448
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (20%) [HD]