STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0767Hypothetical protein/transglutaminase-like enzyme. (295 aa)    
Predicted Functional Partners:
sce6748
Putative membrane protein; Family membership.
  
     0.605
sce0766
Anti-anti sigma factor protein.
       0.508
sce6750
ABC transporter, ATP-binding protein.
  
     0.497
sce6749
Putative ABC transporter permease protein; High confidence in function and specificity.
  
     0.495
sce5872
Putative SAM-dependent methyltransferase; Family membership.
  
     0.470
sce5027
Iron-sulfur cluster-binding protein.
  
     0.447
sce6953
Putative ABC-2 type transport system ATP-binding protein.
  
     0.418
sce6955
ABC-type uncharacterized transport system,permease component; Family membership.
  
     0.411
sce0165
ABC-type transporter substrate-binding protein; Specificity unclear.
  
     0.407
sce4958
Hypothetical protein.
  
     0.403
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.