STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0771Hypothetical protein. (590 aa)    
Predicted Functional Partners:
sce0966
Hypothetical protein.
  
     0.694
sce4610
Hypothetical protein predicted by Glimmer/Critica.
  
     0.651
sce5309
Putative glycosyl hydrolase; Family membership.
  
     0.649
yhjM
Cellulase; Family membership.
  
     0.648
sce4015
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.574
sce3040
Hypothetical protein.
  
     0.529
sce9311
Hypothetical protein predicted by Glimmer/Critica.
  
     0.520
sce2212
Putative topoisomerase; Family membership.
  
     0.511
sce4005
Glycosyl hydrolases family 11 member; Family membership; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
    0.506
sce4860
Hypothetical protein.
  
     0.485
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.