Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gdhBQuinoprotein glucose dehydrogenase; High confidence in function and specificity. (505 aa)    
Predicted Functional Partners:
gnl1
Gnl1 protein; Family membership.
    
 0.903
sce3371
Hypothetical protein predicted by Glimmer/Critica.
    
 0.903
gnl2
Gnl2 protein; High confidence in function and specificity.
    
 0.903
pdhA
Pyruvate dehydrogenase (acetyl-transferring); High confidence in function and specificity.
   
 
  0.811
aceE
Pyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 
  0.811
sce8001
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).
   
 
  0.811
fba1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
  0.808
pgi
Glucose-6-phosphate isomerase; High confidence in function and specificity; Belongs to the GPI family.
    
 0.804
fba2
Fructose-bisphosphate aldolase; Family membership.
   
 
  0.803
gap
Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); High confidence in function and specificity; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.803
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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